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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924041.1_cds_XP_016472499.1_64729
CDS Infomation

[gene=LOC107794515] [db_xref=GeneID:107794515] [protein=autophagy-related protein 3] [protein_id=XP_016472499.1] [location=join(6367..6527,7369..7439,7973..8089,8168..8334,10947..11032,11163..11214,12452..12517,12884..13011,13604..13700)] [gbkey=CDS]
Sequence

ATGGTACTGTCACAGAAGATTCACGAAGCATTCAAGGGCACAGTGGAGAGAATCACAAGT
CCTCGCACCGTCTCTGCTTTCAAAGAGAAAGGCGTTCTCAGCATCAATGAGTTCATCATC
GCCGGCGATAATCTCGTCTCCAAATGCCCTACTTGGTCCTGGGAATCAGGTGAACCTAGC
AAGAGGAAGTCATATTTACCTGCTGACAAGCAATTCTTGATAACTAGAAATGTTCCTTGC
TTGAGGAGAGCCGCATCGGTAGAGGAAGAATATGAAGCTGCTGGAGGTGAAGTTCTGCTT
GATAATGAGGAAAATGATGGTTGGCTTGCCACACATGGGAAACCTAAAGAAAGCAAAAGT
GACGAGGATGACAACTTGCCATCAATGGAAACATTAGAAATTAGCAAAAGGAATACTATC
CAGTCAATCTCCTCATACTTTGGAGGTGAAGAGGAGGAAGATATACCAGACATGGGAGAG
TACGATGAACCTGACAATCTCGTTGAAACGGATCCTGCTACCCTTCAGACAGCATATCTT
GTGGCTCATGAGCCTGACGATGACAATATTCTAAGAACCCGAACTTATGATATCAGCATC
ACGTATGATAAGTATTATCAAACCCCTCGTGTGTGGCTCACTGGATATGATGAGTCAAGG
ATGCTTCTGCAACCAGAACTTGTACTTGAAGATGTCAGTCAAGACCATGCACGTAAAACG
GTAACCATTGAAGACCATCCACATCTACCAGGAAAACATGCTTCGGTACATCCATGTCGA
CATGGGGCTGTCATGAAAAAGATCATTGATGTTCTGATGTCACGGGGAGTTGAACCAGAA
GTTGACAAGTACCTTTTCCTATTCTTGAAATTTATGGCATCTGTCATTCCGACAATTGAA
TATGATTACACCATGGACTTTGATCTTGGTAGCAGCAGCACCTGA

Peptide Sequence

PEP ID

XP_016472499.1
PEP Infomation

PREDICTED: autophagy-related protein 3 [Nicotiana tabacum]
Sequence

MVLSQKIHEAFKGTVERITSPRTVSAFKEKGVLSINEFIIAGDNLVSKCPTWSWESGEPS
KRKSYLPADKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEENDGWLATHGKPKESKS
DEDDNLPSMETLEISKRNTIQSISSYFGGEEEEDIPDMGEYDEPDNLVETDPATLQTAYL
VAHEPDDDNILRTRTYDISITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKT
VTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIE
YDYTMDFDLGSSST

Transcript Sequence

Gene sequence data has not been registered.